Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFVNTLPLIFGLTAALGSSMALALPSDREQPIRVQADSAELDDKQGVAVYRGDVVVTQGSTKLTGNTVTLKQDKNGDIEVVTSVGKPAYYEQKPAPDKDVTKAYGLTIQYFVTQNRVVLIDQAKVIQEGNTFEGEKIVYDTQRQIVNAGRATGSQVTSPRPRIDMVIQPKKKAQ
2R19 Chain:A ((28-164))
------------------------VTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPG-QGKEVIDGYGKPATFYQMQD-NGKPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKG-------KRVTTVL-------
General information:
TITO was launched using:
RESULT:
Template:
2R19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22100 for 994 contacts (-22.2/contact) +
2D Compatibility (PS) -15010 + (NN) -6767 + (LL) 2600
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -50377.0 ( -50.68 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2R19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R19-query.scw
PDB file :
Tito_Scwrl_2R19.pdb
: