Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEFHDDDSQFEEKSKSQIKRELHALQDLGERLTTLQPQLLERLPLTDPLRKALLEAPKHKAHIARKRHIQYIGKLMRDQDVDAIVALIDQVD---SSTRQYNERFHALERWRDQLIAGGDAALDAFVGEFPECDRQHLRGLVRHAQHEAAHNKPPAAARKVFKYIRELDETKRGLR
1Z1W Chain:A ((506-579))
----------------------------------------LDRIGLVDDLFAFLLSG-----HIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHAFDDDARAFCRSRMQFLTG----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z1W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22512 for 430 contacts (-52.4/contact) +
2D Compatibility (PS) -7540 + (NN) -2668 + (LL) 7152
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -31468.0 ( -73.18 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_1Z1W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z1W-query.scw
PDB file :
Tito_Scwrl_1Z1W.pdb
: