Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAESRPARRFARIDRLPPYVFNITAELKMAAR---RRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFRADGLLSPQRKVDSLAE |
1O4S Chain:A ((17-383)) | -----------RISEIP---ISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVK-YTDPRGIYELREGIAKRIGERYKKDISPD-QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSY---MVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKV-----RGDDVKFCERLLEEKKVALVPGSAFLKPG--FVRLSFATSIERLTEALDRIE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214518 for 3190 contacts (-67.2/contact) +
2D Compatibility (PS) -40929 + (NN) -31517 + (LL) 2692
1D Compatibility (HY) -27200 + (ID) 5650
Total energy: -317122.0 ( -99.41 by residue)
QMean score : 0.586
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