Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSQDIHARSATTTPMPSVRNQEEVAKLIDVSKCIGCKACQVACSEWNELRDEVGHNHGTYDNPMDLTADSWTVMRFTEHENEAGNLEWLIRKDGCMHCAEPGCLKACPSPGAIVKYANGIVDFNQDKCIGCGYCITGCPFDIPRISQKDHKAYKCSLCSDRVSVGMEPACVKTCPTGAIVFGSKEDMKE------HAAERIVDLKSRGYENAGLYDPEGVGGTHVMYVLHHADKPSLYAGLADQPSVSPLVSLWKGVTKPLALLAMGATVLAGFFHYVRVGPNRADDEEDHGQAEAPVHQVDPSVHTFDPHERR
2VPW Chain:B ((5-166))-------------------------AMAIDLSLCVGCAACAVACKMENEVPPGV--------------FNLWIRER---EVGEYPNLVVEFRPEQCLHCENPPCVPVCPT-GASYQTKDGLVLVDPKKCIACGACIAACPYDA-RYLHPAGYVSKCTFCAHRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDVLR-------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63128 for 1119 contacts (-56.4/contact) +
2D Compatibility (PS) -16189 + (NN) -6006 + (LL) 6696
1D Compatibility (HY) -10400 + (ID) 3250
Total energy: -92277.0 ( -82.46 by residue)
QMean score : 0.272

(partial model without unconserved sides chains):
PDB file : Tito_2VPW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VPW-query.scw
PDB file : Tito_Scwrl_2VPW.pdb: