Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTTPHLMLEPAFHPGLDTAGSGRDAIGLGAATSGRLDARHGTILSLEDINVSF-DGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYFGDT-LDLTRMSEVQIAQAGIGRKFQKP--TVFEALSVFENLELAQRADKSVWASLRARLDGT-QRERIEEVLATIRLLESRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAGMTDAETEFTAELFKSLARKH--SLMVVEHDMGFVGSIADHVTVLHQGHVLAEGSLAEVQADEQVIEVYLGR |
3GFO Chain:A ((7-238)) | -------------------------------------------ILKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRES-IGIVFQDPDNQLFSA-SVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHL---------KDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVI------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -112589 for 1760 contacts (-64.0/contact) +
2D Compatibility (PS) -24236 + (NN) -8746 + (LL) 3084
1D Compatibility (HY) -20000 + (ID) 3750
Total energy: -166237.0 ( -94.45 by residue)
QMean score : 0.453
|
|
|