Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATYNADAIEVLSGLDPVRKRPGMY---TDTTRPNHLAQEVIDNSVDEALAGHAKSVQVILHQDNSLEVIDDGRGMPVDIHPEEGVPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALSTRVEVRVKRDANEYRMTFADGFKD-SDLEVIGTVGKRNTGTSVHFWPDPKYFDSAKFSVSRLKHVLKAKAVLCPGLSVVFEDKNTGERVEWHFEDGLR---SYLTDAVAELPRLPDEPFCGNLEGSKEAVSWALLWLPEGGESVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRGVKLAPEDVWERIAFVLSMKMQEP--QFSGQTKERLSSREAAAFVSGVVKDAFSLWLNEHAEIGLQLAELAIS-----NAGRRLKAGKKVERKKITQGPALPGKLADCAGQEPMRAELFLVEGDSAGGSAKQARDKEFQAIMPLRGKILNTWEVDGGEVLASQEVHDIAVAIGVDPGAS-DLAQLRYGKICILADADSDGLHIATLLCALFVRHFRPLVEAGHVYVAMPPLYRIDLGKDIYYALDEAERDGILERLAAEKKRGKPQVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTLEDATGTLEIMDMLLAKKRAGDRKSWLESKGNLAEVLV |
| 4I3H Chain:A ((24-642)) | ----------------AVRKRPGMYIGSTDGAGLHHLVWEIVDNAVDEALS---DRIDVTINKDGSLTVQDH---------------TVEVIFTILHAGGKF----------LHGVGSSVVNALSSWLEVEITRDGAVYKQRFENGGKPVTTLKKIGTAPKSKTGTKVTFMPDATIFSTTDFKYNTISERLNESAFLLKNVTLSLTDKRTDEAIEFHYENGVQDFVSYLNEDKEILT--PVLYFEGEDNGFQVEVA---LQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKVMNDYARKTGLLKEK---EGSDYREGLAAVLSILVPEEHLQFEGQTKDKLGSPLARPVVDGIVADKLTFFLMENGELASNLIRKAIKARDAREAARKAR-----------------GKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKG-------AYAW-DGELEELR---------LQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDK-VEPRRKWIE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I3H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237350 for 4108 contacts (-57.8/contact) +
2D Compatibility (PS) -56633 + (NN) -17840 + (LL) 5268
1D Compatibility (HY) -42800 + (ID) 11800
Total energy: -361155.0 ( -87.92 by residue)
QMean score : 0.402
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