Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDAPLLSEKDRQGKAFADADCFP
2IXI Chain:A ((4-184))
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDAPLLSEKDRQGKAFADADCFP
General information:
TITO was launched using:
RESULT:
Template:
2IXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90776 for 1399 contacts (-64.9/contact) +
2D Compatibility (PS) -18852 + (NN) -3214 + (LL) 0
1D Compatibility (HY) -24800 + (ID) 9050
Total energy: -146692.0 ( -104.85 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_2IXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IXI-query.scw
PDB file :
Tito_Scwrl_2IXI.pdb
: