Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATAPRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQSSAQ
2O6U Chain:A ((6-144))
-----RPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQS---
General information:
TITO was launched using:
RESULT:
Template:
2O6U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104884 for 1039 contacts (-100.9/contact) +
2D Compatibility (PS) -14634 + (NN) -2599 + (LL) 644
1D Compatibility (HY) -20800 + (ID) 6950
Total energy: -149223.0 ( -143.62 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_2O6U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6U-query.scw
PDB file :
Tito_Scwrl_2O6U.pdb
: