Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYI--GKGYQVLNDQG-RVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLYSSLEDVDRARERRLAELDGLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQKAREDAERTYAADRARLSQLLGVSP |
4D4O Chain:A ((174-265)) | ------------------------------------------VLVYDTGSVAVDYVAMGKDFMVIVDEGGRIVHASGRLPTGFELKQQ-----QKRHNLVVLCMWTSIHLWN-------ARLNTVESFGRGTHSQLFPQE-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4875 for 539 contacts (9.0/contact) +
2D Compatibility (PS) -8667 + (NN) -3863 + (LL) 9304
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -7651.0 ( -14.19 by residue)
QMean score : 0.118
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