Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNRGVVYLGPGKVEVQNIPYPKMQDPQGRQIDHGVILRVVSTNICGSDQHMVRGRTTAPEGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCRTCKEQHTGVCLTVNPARAGGAYGYVDM-GGWVGGQAEYVLVPYADFNLLKLPNREAAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASARLLGAAVVIVGDVNPTRLAHAKKQGFEIADLSKDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHSGSQQEAPATVLNSLMGITRVAGKIGIPGLYVTEDPGAVDAAAKHGALSIRFGL--GWAKSHSFHTGQTPVMKYNRQLMQAIMWDRIKIADIVGVEVITLDDAPKGYGEFDAGVPKKFVIDPHNLFRAA |
| 4CPD Chain:A ((2-334)) | ----RAVVFENKERVAVKEVNAPRLQHP----LD--ALVRVHLAGICGSDLHLYHGKIPVLPGSVLGHEFVGQVEAVGEGIQDLQPGDWVVGPFHIACGTCPYCRRHQYNLC------ERGGVYGYGPMFGNLQGAQAEILRVPFSNVNLRKLPPNLSPERAI----FAGDILSTAYGGLIQGQLRPGDSVAVIGAGPVGLMAIEVAQVLGASKILAIDRIPERLERAASLGAIPINAEQENPVRRV-------------------------RSETNDEGPDLVLEAVGG----AATLSL-ALEMVRPGGRVSAVGVDNAPSFPFPLASGLVKDLTFRIGLANVHLYIDAVLALLASGRLQPERIVS-HYLPLEEAPRGYELFD------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180774 for 2974 contacts (-60.8/contact) +
2D Compatibility (PS) -34967 + (NN) -8123 + (LL) 3804
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -248710.0 ( -83.63 by residue)
QMean score : 0.608
|
|
|