Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNALVRLTQVGVSFNGQAVLSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVWR------------RPRLTIGYMPQKLHVDATLP-----LSVLRFLRLVPGVKRE-QALAALREVGAAHVLERPLQSISGGELQRVLLARALLRKPELLVLDEPVQGVDVAGQAELYRLIGKLRDRYGCGVLMVSHDLHLVMSATDQVVCLNR-HVCCSGHPEQVSGDPAFVELF-GQDARSLAIYHHHHDHAHDLHGEVVKAGPGALPPGTRFTPVHKHGPDCNHG |
| 4P33 Chain:A ((11-235)) | -------------AYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRDS-GLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLG-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152931 for 1535 contacts (-99.6/contact) +
2D Compatibility (PS) -22270 + (NN) -9304 + (LL) 2576
1D Compatibility (HY) -15200 + (ID) 3500
Total energy: -200629.0 ( -130.70 by residue)
QMean score : 0.597
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