Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPS----LCTHLIYAFAGMTNH--QLST----------------TEWNDE----------------------TLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYS----------------FDGLDLDWEYPGSQ-GS------PAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKI--AQNLDFVNLMAYDFHGSWEKV-TGHNSPLYKRQEESGA-AASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN |
| 1KFW Chain:A ((7-424)) | -------------------NGYRNVGYFAQWGVYG---RAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWTW-SKNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNK-KYVLSAFLPANPADIDA-GGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLAAYGRGWTGAKNVSP--WGPATDGAPG---TYETANEDYDKLKTL--GTDHYDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMWWELSG-DRNG--------ELVGAMSDKFRAA------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141487 for 3042 contacts (-46.5/contact) +
2D Compatibility (PS) -36781 + (NN) -10110 + (LL) 3332
1D Compatibility (HY) -20000 + (ID) 5500
Total energy: -210546.0 ( -69.21 by residue)
QMean score : 0.451
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