Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MPKLNSTFVTEFLFEGFSSFRRQHKLVFFVV------------------------FLTLYLLTLSGNVIIMTIIRLD------------------HHLHTPMYFFLCMLSISETCYTVAIIPHMLS---------GLLNPHQPIATQSCATQLFFYLTFGINNCFLLTV-----------------MGYDRYVAICNPLRYSVIMGKR----ACIQLASGSLG--------------------------IGLGMAIVQVTSVFGLPFCDAFVISHFFCDVR-----------HLLKLACTDTTVNEIINFVVSVCVLVL----------------PMGLVFISYVLIISTILKIASAEGQKKAFATCASHLTVVIIHYGCA------SIIYLKPKSQSSLGQDRLISVTYTHHSPTEPCCVQPEE-QGGQRCSAQSRGAKNSVSLMKRGCEGFSFAFINMY---------- |
| 4NNB Chain:A ((4-527)) | TSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGRLLQVGHAQPIAHFPKPWLAALSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPALIEAIEKESPALLKNMEEAGWIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLGVVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDVGSAPEVASLSPAAVVFQGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARVVREEISSLLADESADSHRRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVNDARVPGGVRKA---RGTWEQVSLVREELLGRGATILTAAQVRDMFGLGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219138 for 2227 contacts (-98.4/contact) +
2D Compatibility (PS) -33909 + (NN) -3510 + (LL) 236
1D Compatibility (HY) -2400 + (ID) 3100
Total energy: -261821.0 ( -117.57 by residue)
QMean score : 0.060
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