Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEENHTMKNEFILTGFTDHPELKTLLFVVFFAIYLITVVGNISLVALIFTHRRLHTPMYIFLGNLALVDSCCACAITPKMLENFFSENKRISLYECAVQFYFLCTVETADCFLLAAMAYDR-YVAICNPLQYHIMMSKKLCIQMTTGAFIAGNLHSMIHVGLVFRLVFCGSNHINHFYCDILPLYRLSCVDPYINELVLFIFSGSVQVFTIGSVLISYLYILLTIFKMKSKEGRAKAFSTCASHFLSVSLFYGSLFFMYVRPNLLEEGDKDIPAAILFTIVVPLLNPFIYSLRNREVISV-LRKILM-KK |
| 4I17 Chain:A ((4-226)) | -----TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ----------------------DSVTAYNCGVCADNIK------KYKEAADYFDIAIKKNY----NLANAYIGKSAAYRDMK----NNQEYIATLTE--GIKAVPG-------------------------------------------NATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAMI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212578 for 1729 contacts (-122.9/contact) +
2D Compatibility (PS) -22503 + (NN) -2771 + (LL) 8068
1D Compatibility (HY) 10000 + (ID) 1650
Total energy: -221434.0 ( -128.07 by residue)
QMean score : 0.221
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