Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------QQQPANCNGQLNQLIPCLSYVQGQATQPA---QSCCSGLKSIAGSNPACLCSLISA-------NAGSIPGIN----STLALELPAKCNLQGLNPSLCSVFISGFLPLR----------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQC-------NGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV------VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41138 for 471 contacts (-87.3/contact) +
2D Compatibility (PS) -8130 + (NN) -4661 + (LL) 368
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -58061.0 ( -123.27 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: