Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIENIQQEFFPLFDKIKKEGDPIYNARVGFNIVKSLIERGTGWNKDEIYEVLQKELNKMERAQQELEKEAERVLSRYIIDDDVKGAVKGVSIYGNHASIKLEDNKKEFKISEFLNSDFCQKNGISGFSTLHRDEKSGMHGFVAEEGEGKDKRKVRHYVVTDGSYEMTLNWYDKEGKKCTIRININANSIKLIGGNITEEQLKDLSKANWDVKIGGLFLHEIEFRKTRENEINMSFETAIKIFGRSIQTTDMNREIGSQNAMTSTTNSHAPTKENPPLPPHRVSSLKKGVEQRKTKSLDHQSNGQKVEFNKYIQSNTLDLHELNSMNVPKLLELLKKEQNTTQINLGWNSIDNKNAEKLFRQRGLVIMANCREEENPGDQGYNLQSLFEVPTPSPLRTSSLK-KNVSDEQGENISFKPISQSQDNRQKDERYDNLTFVMFRYTTSGRKKTVTEEDLQVKSAVFALPTQDVTLKKVEGTFKSEDAKKSDNMRDKQTSQDGVASILARRAEIEFLY-SESERGDGLSDPEDDRSGNKDEYLTLLNPQSDDKNAKRGEKYENCDCNDNLEHIYENTDWLCDDKQDNRQRDKRYDNHTFAMFVYTLPGSK----------------------RPDDLHRNEQKLDNQQQPEIQQQGQSHSRPQSDSKGNLDVKGIQPSALSEDGDRPISTSTDKRNTKQLEYGKNSK---------DHNSETCMVPSKPAGKESKSIQFTNPSNQMVGKLEKVLKKLDRESEKTVQQVAEGSVSINKPLSSVSTDGNMDAEQNSHTQSEETNLSTPEKTNVNSSTSFKELEQRLSQKNYELKKISSK-VRYISPQTKEYLMEAELLKDSSTDIRKAIERKNAHTSPTTDKNSELYKLLEKDKTQLKVRVIEKVVEGASAKHTDNYDRNRITLGNKNRKLLWTKHVKQQQEKGKGISI |
| 5CWW Chain:B ((3-593)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIKSFAPAWLNEPAPGHKLFA----PKPGPRRTIARRGTEIFVACGKQIRWGDLAQLKESWESRPSDDGAATAGYRIIKTPVADDIRQLVMSPNQDFLAVLTSHTVHICILPDSSHLHIQDTTPFKPKFWTLGPTTHVTSRSAVVSAVWHPLGVNGHALVTVTED-------AIVRVWELSTADRWTFDAPTLAIDLKKLADATYLDQDFGVSTSATNKGFSPDAFDMEVAAACFPTRDSGGWAPMTLWLAMTSGDVYALCPLLPQRWTPPPTLIPSLSASIVAKVAAAEDNPESTPEERLVAQQQLEWMSEIDNQEPKLVEEATGEATIEVYTRPSRPGLVPKLQGPFDFDLNPEDEQDDEVELKDIYVIGEKPRNGLSLNIICLLSTSGQVKICLDIDGVEAQWLPPRSKNKRLFAPPPEPPSLLTFQTFDTLKPAEVTPDGWPMFSED----ATSPYSFYVTHPAGITYISLTPWVFRLESELQSDSEAGTEFRIDLLAK------GQGSERDRIFTQTRTQSPL---------AAATSIDDPDLGYFILSATQTDPIALFFETP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 341368 for 3853 contacts (88.6/contact) +
2D Compatibility (PS) -52071 + (NN) -6033 + (LL) 24532
1D Compatibility (HY) -800 + (ID) 3400
Total energy: 303596.0 ( 78.79 by residue)
QMean score : -0.001
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