Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MECKLVNLSNNDVGTTQLNPLIFSVEQKLSILHDIVRWQLAKRRAGTHKVKGISDVSGTTAKPYSQKRTGRARQGSLRSPQFRGGGVIFGPI-VRSHAYSLNKKVRKFGLKVALSLKYLNNQVIILNNLNINVKKTSEMCKYIQNFKFS-SFLIV-GD---YEDSLLRAARNLHYVNLIKPIGLNVFDILNHECIMLTSDALRYLEGRLL
3J7Y Chain:F ((68-274))
---SLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSMLKHQTLVLTLPTVAFLEDKLL
General information:
TITO was launched using:
RESULT:
Template:
3J7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125944 for 1369 contacts (-92.0/contact) +
2D Compatibility (PS) -21487 + (NN) -9785 + (LL) 368
1D Compatibility (HY) -14800 + (ID) 3700
Total energy: -175348.0 ( -128.08 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Y-query.scw
PDB file :
Tito_Scwrl_3J7Y.pdb
: