Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSILLTRPLSDSLNTRSTLKKYGYKVYIEPAFTIKHLQPDI---SAYKFDVVISTSKNS-VKAFSQICRVDDLPIITVGNSTMQTAKDSGFSDIISA-DSNVEGLISFVKNYYSRAVKFLYIRGQEVS------CDLKKRLSEEGFNVREVILYKTIIKRG-LTNRCKNLLL-GGRINSVAFFSSQTARIFCSLVLKSGLSNVMDNITAYAMSKNIVDSLKPIKWKKIITSRLPTQENLIDIINKDC |
| 3K9C Chain:A ((33-225)) | ---------------IYAAATRRGYDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTRFDTDELGA--LADRVPALVVARASG----LPGVGAVRGDDVAGITLAVDHLTEL--GHRNIAHIDGADAPGGADRRAGFLAAMDRHGLSASATVVTG-GTTETEGAEGMHTLLEMPTPPTAVVAFNDRCATGVLDLLVRSGRD-VPADISVVGYDDSRLARIPHVQMTTISQDATHMAEAAVDGALAQI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89750 for 1293 contacts (-69.4/contact) +
2D Compatibility (PS) -19477 + (NN) -6000 + (LL) 1628
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -117049.0 ( -90.53 by residue)
QMean score : 0.426
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