Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCKLDELLENEDKRQAFMKSITDRGLQ-ISGFSCHN-NPISPDP-IEAKEADETLRKTIRLANLLDVPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKEQDVKIAIELHAGF---LVHTPYTMLKLREATN-E-YIGANLDPSHLWWQGIDPI----AAIRIL-----GQANAIHHFHAKDTYINQENVNMYGLTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQLIINGYD-YVLSIEHEDPIMS---VEEGFQKACQTLKSVNIYDKPADMWWA |
| 3AAL Chain:A ((6-291)) | LKIGSHVSMSGKKMLLAASEEAASYGANTFMIYTGAPQN---TKRKSI--EELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPGAHVG-------------------AGVEAGLRQ-IIRGLNEVL--TREQNVQIALETMAGKGSECGRTFEELAYIIDGVAYNDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGLG--RLKVLHINDSKNPRGS-----------------RKDRHENIGFGH--IGFAALNYIVHHPQLEDIPKILETPYVGEDKNNKKPPYKHEIAMLRAQSFD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139343 for 2273 contacts (-61.3/contact) +
2D Compatibility (PS) -28691 + (NN) -9854 + (LL) 2332
1D Compatibility (HY) 2400 + (ID) 2050
Total energy: -175206.0 ( -77.08 by residue)
QMean score : 0.513
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