Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNV-DGKIVSADVQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELVSKIKEL
3MQW Chain:B ((25-148))
LTVVASPLAPEAVGAYSQAIICNGMVYCSGQIGLDRKTGDFAGKTIEEQSKQVMTNLKYVLEEAGSSMDKVVKTTCLLADIKDFGVFNGIYAEAFGNHKPARACFAAAALPKGALVEVECIATL---
General information:
TITO was launched using:
RESULT:
Template:
3MQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39288 for 947 contacts (-41.5/contact) +
2D Compatibility (PS) -13654 + (NN) -7828 + (LL) 344
1D Compatibility (HY) -13200 + (ID) 2700
Total energy: -76326.0 ( -80.60 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_3MQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MQW-query.scw
PDB file :
Tito_Scwrl_3MQW.pdb
: