Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDQQSKEQLNIREMTKEDVPQVFDLERRS-----FND----SSWTIDAFYHEIE----QNNFAKYFVLEFEQQIIGYLGLWIVI--DQAQITTVAIDDNYRGYGLGQMLLKYGINYAS--HTCDVMSLEVRVNNKVAQHVYENLGFQYGGKRKNYYG--E-GEDAMVMWVNLND
3OWC Chain:A ((13-178))
-------ELQLVPFQLGHFPILQRWFATEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRNGVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGLRRSATRVGRERWNVVLMGLLRQ-
General information:
TITO was launched using:
RESULT:
Template:
3OWC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112271 for 980 contacts (-114.6/contact) +
2D Compatibility (PS) -15249 + (NN) 397 + (LL) 436
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -134287.0 ( -137.03 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3OWC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OWC-query.scw
PDB file :
Tito_Scwrl_3OWC.pdb
: