Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVNYIVEEVNQKEVDMVLIGGDLVDENIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLNTLDMTILGNECVHLGGINLCGVYDYFARKRQDFAPDIDKALKKRDSSKPTILLAHQPKQI--RSLKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 1S3L Chain:A ((26-183)) | ------------------------------------------------------------------------------------------------------------------------------------------------MKIGIMSDTHDHL----PNIRKAIEIFNDENVETVIHCGDFVSLF------VIKEFENL--NANIIATYGNNDGERCKL--KEWLK------------DINEENII-------------DDFISV-----EIDDLKFFITHGHHQSVLEMAIKSGLYDVVIYGHTHERVFE-----------------E-V-DDVLVINPGECCG---YLTG-IPTIGILDTEKKEYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109021 for 1265 contacts (-86.2/contact) +
2D Compatibility (PS) -16524 + (NN) -3955 + (LL) 17164
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -119886.0 ( -94.77 by residue)
QMean score : 0.360
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