Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVA-PSRRPTDGRYGENPNRLGSYYQFQVVIKPSPSNI-------QELYLKSLEVLGINLN---EHDIRFVEDN-WESPTLGAW---GLGWEVWLD----------GMEVTQFT----YFQQVGGIPC----SPIPVEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
| 3W3S Chain:A ((336-490)) | ----------------------------------------------LPIKLYDCSGWTYRWEGGA-AKGLERVNEFQRIEHVWIAEPEEAYRIRRELLEATKRVAEELELEWKVVVSDDPFYLEGRLLEDRDIELPDVPSYEFEVYLPFKGERSSEEAWISVGSFNVHGEHFVDGFNVKEKSGRTLFTGCAGLGVTRWVVGLLAQHGFYPYEWPEPILERIDEKFGGLPEVPKTLTWPE-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39831 for 740 contacts (-53.8/contact) +
2D Compatibility (PS) -13305 + (NN) -1176 + (LL) 11908
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -49004.0 ( -66.22 by residue)
QMean score : 0.278
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