Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNELLKIFLSMALTSVILIPLVWILRRIFNRYLSKGKIYYSWLIVFFFLTIPFAYIFFSFTKDNAFMWRNKTEFDGVTSIVMDQSGIVLQHDFKTVFWMTVLDYIWVAWLVIFLLTFIYRIASYRNFKKYVFSGARRVDDLEQLDILAETIEELNIKRPVELMINPLISSPIFLGLKKNVIVIPDETFSNVELHYIFKHELVHCKRKDMYYVWMVQFFTCIYWFNPLMYLMNKRIQMDRELACDEAVLATLSKSKYIGYGDTLLSSLAKSGNYKESYVAVSLHENTKALKERLMFIANYKAQNKKHNILFSISMIVLCIVGVLFSAFQADVFTLEKKKGITIERRK |
| 2JVG Chain:A ((195-266)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAMVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKAPMDVKEHLQKQLDALVAQKDAEKKVA-------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4821 for 379 contacts (-12.7/contact) +
2D Compatibility (PS) -7629 + (NN) -2608 + (LL) 26624
1D Compatibility (HY) 1600 + (ID) 250
Total energy: 12916.0 ( 34.08 by residue)
QMean score : 0.143
|
|
|