Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDQQKKIQILKDLVNIDSTNGH------EEQVANYLQKLLAEHGIESEKVQYDL----------DRASLVSEI-GSSNEKVLAFSGHMDVVDAGDVSKWKFPPFEATEHEGKLYGRGATDMKSGLAAMVIAMIELHEEKQKLNGKIRLLATVGEEIGELGAEQLTQKGYA---DDLDGLIIGEPSG-----HRIVYAHKGSINYTVK--STGKNAHSSMPEF-GVNAIDNLLLFYNEVEKFVK--------------------SIDA---T---------N-------------EILGDFIHNVTVI----DGGNQVNSIPEKAQLQGNIRSIPEMDNETVKQVLVKIINKLNKQ--ENVNLELIFDYDKQPVFSDKNSDLVHIAKSVASDIVKEEIPLLGISGTTDAAE-FTKAKKEFPVIIFGPGNE--TPHQVNENVSIGNYLEMVDVYKRIATEFLS |
2ZOG Chain:A ((18-476)) | -NQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIPVTLTFQE-ATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81807 for 3051 contacts (-26.8/contact) +
2D Compatibility (PS) -41193 + (NN) -22441 + (LL) 352
1D Compatibility (HY) -14400 + (ID) 4000
Total energy: -163489.0 ( -53.59 by residue)
QMean score : 0.506
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