Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MAEYQSQLARIQAKITTLKEKDVDLNLFGSESHAYKLNQPLSNQTIAAFENEHQI--ALPQGYRAFLEQIGDGGMGPYYGLETLVDGLCSSLDYKAEKYGVQTLSKPFPHTDDWNGPGYKEGMSDEAYDAWQELCFSDKEVFGLLRIANFGCGVSINLVVNGPSYGEIWVDDRNNDNGVYPDFYFGNEERLGFLEWYELWLDKSIEEFEKA |
4H9N Chain:C ((5-209)) | RGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQEARLKRKLIRLFGRLCELKDCSSLTGRVIEQRIPYRG-TRYPEVNRRIERLINK-PGPDTFPDYGDVLRAVEKAAARHSLGLP---RQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARRLRENRSLAMSRLDEVISKYAMLQDKS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5464 for 1134 contacts (4.8/contact) +
2D Compatibility (PS) -20772 + (NN) -3527 + (LL) 1380
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -23255.0 ( -20.51 by residue)
QMean score : 0.093
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