Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLYVSGCPFHCEGCYNKAAQSFKYGKPYTKELEDDILKDIGHESVQGLTLLG--GE-PFLNTATCLSIVKRIRATYGETKDIWSWTGYTWDEMMQETADKLELLSLIDVLVDGRFEQKLFDPNLAFRGSSNQRIIDVQKSLAAGEVVLYEL
3B4U Chain:A ((20-67))
-------------------------------------------------------------TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIA-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3B4U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12163 for 216 contacts (-56.3/contact) +
2D Compatibility (PS) -4680 + (NN) -1643 + (LL) 8204
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -12232.0 ( -56.63 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_3B4U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B4U-query.scw
PDB file :
Tito_Scwrl_3B4U.pdb
: