Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYIAGIDIGNSTTEVALAMANSSKEAAFVASAITDTTGIKGTKQNLHGIFKALRLALEKVNATTEDLAEIRINEATPVIGDVAMETITETIITE--STMIGHNPKTPGGLGMGSGVTVLLDDVTSKSKDADYIVIIPKTVDFEDAAKQINTYVENGYQITAAILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISN---PYGIATVFHLNSDETKNIIPVARALIGNRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGALTTP----GTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEIGLEDRYLAEDIKKYPLAKVESIFHIRHEDGTVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSALDFEIPQLITDALSHYSLVAGRGNIRGKE---GPRNAVATGLILAGGAKA--------------- |
| 4XDN Chain:A ((24-640)) | -------GDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTLSVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHDLPLMRDSKFHYKIALRNCN--ELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTSFHGLLSQCREK--SQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLALEMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKELKNILLLLQSVSYIVNCYD-EKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFCEFYKVWEQTLLKGAVVLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLAQSGGTSSEVKMISLLNCYTVQAARVSRCS--------GDKQGELVEQCNKV-WLQVEKLLQ----ETDLQF-NPIWECTVTILWLFSHFEPFSWNPLPCS-DKQRAEYVSKLREFYSSN--KFVNRFKLKKALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAMRGKDVALTNAKLEALVKQITS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76410 for 4426 contacts (-17.3/contact) +
2D Compatibility (PS) -59666 + (NN) -1430 + (LL) 3400
1D Compatibility (HY) -17200 + (ID) 4150
Total energy: -155456.0 ( -35.12 by residue)
QMean score : 0.157
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