Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGS-NG--EREADFINVVMWGR-LAETLASYGTKGSLISVDGELRTRKYEKDGQTHYITEVLAS----SFQLLESRSQRAMRENNISGDLSDLVLEEEELPF
3ULP Chain:A ((81-194))
SLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTDWHRIVVYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHT-SQPKQITEIILSYNKGDLIFLD----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ULP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39264 for 622 contacts (-63.1/contact) +
2D Compatibility (PS) -11191 + (NN) -2991 + (LL) 1712
1D Compatibility (HY) -8800 + (ID) 1300
Total energy: -61834.0 ( -99.41 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_3ULP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ULP-query.scw
PDB file :
Tito_Scwrl_3ULP.pdb
: