Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKTKFSDPLEQLAKKRKRKTLFKT-------VVLALITVLLVVGIAFKGFTYLTSKNGQKTYHNFELLSEIAYPNISYDSLYYQPSGQFTGKVHADRFKD-IDGVQIPYSSFEENYSISGTFGTNADEKSEKNGLYDRGTRQKVPQFFNKNVKYKKGEAKTTPTNDLKYVNKLNNDLIEIAITFDKSYSYKEIKTMI----PNNIKQNWLWIGTSTELDTSYWPTKYQFGTDPETLNTPQIFIDKIKENLKGNSKVYFNNINIYSDLEKYAKKYDKVNNSDKLKFSGIILTGKAENFKQLKEKEWVHASSIGANIEYKPYYKLDKE |
| 1K6D Chain:A ((1-219)) | -MKTKLMTLQDA-TGFFRDGMTIMVGGFMGIGTPSRLVEALLESGV--RDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIG------TNPETGRRMISGEMDVVLVPQGTLIEQIRCGGA-GLGGFLTPTGVGTVEG--------------------KQTLTLD---GKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGEL--QPDHIVTPGAVIDHIIVSQES-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16742 for 1650 contacts (10.1/contact) +
2D Compatibility (PS) -21587 + (NN) -2510 + (LL) 6160
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -7295.0 ( -4.42 by residue)
QMean score : 0.193
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