Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIEALMEKERRVQYRLLSFLRGSPQAIALKLALLETGLSRATLLKYINNLNSYFEQEKVNCRIVYYKDKLFLEEDYNLSNQEVLKALMKDSIKYTILISLFNQRQFTIVGLSQELMVSEATLNRHLAHLNE-LLAEFDIAISQGKQIGDELQWRYFYYELFKQLWSYDKC--QNMIKKLDLDSLILLIERLAQH----TLTREAQQNL-GLWFSICHHRLLAMEKISDNLKPIVEHYQCNAFYKRLDAALVLYMSRFA------LEYREGEVLATFAFLHSQNILPINTMEYIMGFGGPIIDCVTETIIY-FKKESILADETSDQVIYQLGQLYSHYYFFKGHILVEQPDLEQTYRLIDHNMRDKLHHISKKIIANVN------RIRPLTEDGCSLLTLHLLELLIFSKNSQKMPFRIGLDMTGNAVE--QSLLEYRIRQHFSGNNSIQVEPYDEGKGFDMVIYQSRSRPYKAKLTYCLNKGASERELQEIDSLIYDN |
| 4L9P Chain:B ((68-519)) | ------------VHPGIPALFREPPL-IHDLLSTETTELQSETVNKCLPLLKGIHNSQKGP----FNKYGIP-----ALQRKDHLEYLYDSLEDYP---ASFVALDASRPWMVYWALAGLCLLGEDVTRFRERVISTFTAAQNSTGGIGGGHGQMSHVASSYAAVLSIAMVGGEEAFKLIDRKAMWKWLGKLKQPDGGFTVCEGGEEDVRGAYCAMVVHALLDLPL---ALPPEAEARQNG--LETFTDGLPEYLSRCQTYEGGISGSPGSEAHGAYAFCALACLCLLGRPEVVVPRYMNIATLLPWLSARQYAPEGGFSGRTNKLVDGCYSHWVGNCWPLVQAALDGTQPLAGPKRSSVGNLYS-REGLTRYILSCCQCKLGGLRDKPGKHPDSYHTCYALTGLSTV------QYYHYCTDSSVSSKDDFSSAFSWKHDPNFA----------SDGQGSDIGVFTENDRLVPFHPIFVIPHKSAEDIRVWFENQSFDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181062 for 3668 contacts (-49.4/contact) +
2D Compatibility (PS) -43538 + (NN) -5007 + (LL) 4060
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -240097.0 ( -65.46 by residue)
QMean score : 0.252
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