Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMS---LMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFA---MEGDIILAEPQALVGFAGRRVIETTVR-E--------------D----LPEGFQKAEFLLEHGFVDAIINRTELRDCIAQLIAFHGNEVGHE |
| 3IAV Chain:A ((291-517)) | -----------------------------------------------------------SANQPYDMHSVIEHVLDDAEFFETQPL------------------------FAPNILTGFGRVEGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDAFNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKL---IFAYAEATVPLITVITRKAFGGAYVVMGSKHLGADLNLAWPTAQIAVMGAQGAVNILHRRTIADAGDDAEATRARLIQEYEDALLNPYTAAERGYVDAVIMPSDTRRHIVRGLRQLRTKRESL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138026 for 1629 contacts (-84.7/contact) +
2D Compatibility (PS) -21980 + (NN) -11068 + (LL) 5032
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -170542.0 ( -104.69 by residue)
QMean score : 0.386
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