Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
| 1I39 Chain:A ((1-200)) | ----------MKAGIDEAGKG---------CVIGPLVVAGVACS--DEDRLRKLGVKDSKKLSQGRREELAEEIRKIC-RTEVLKVSPENLDERMAAKTINEILKECYAEIILRL----KP----EIAYVDSPDVIPERLSRELEEITG---------LRVVAEHKADEKY--------PLVAAASIIAKVEREREIERLKEKFGDFGSGYASD-PRTREVLKEWIAS-GRIPSCVRMRWKTVSNLRQK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 75874 for 1620 contacts (46.8/contact) +
2D Compatibility (PS) -20841 + (NN) 3065 + (LL) 4208
1D Compatibility (HY) 0 + (ID) 1600
Total energy: 60706.0 ( 37.47 by residue)
QMean score : 0.121
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