Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIISLGEVLLRLSPPQYHTLMQANHLKCQFGGSELNVLASLAQLGHHVGLVSALPDNDLGKMARQFILSQQISPAAIIK-KEGRLGIYYYEQGF---SVRTNKVIYDRNYSSFWESTLSDYDFTSIFKGVDWFHVSGITPALTKDLYEVTRFLMTKAKEGGVKVSIDLNFRESLWSSFQEAREQLSPLLGL--LDVCFGLEPIYLAGESEDLKDELGLSRPYLDIELLEKITQKIVQEYGLDYIAFTQREMEYTNQYMLKSYLYHNNMLYQTDKTGVEVLDRVGTGDAFAAGLIHALLEKETPQRALEIAMATFKYKHTIQGDINIMTR-DDIAYLIEKETNDIKR |
| 2DCN Chain:A ((2-309)) | -AKLITLGEILIEFNALSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLK-SESIYYRKG-SAGSKLSPEDVDEE-YVKSADLVHSSGITLAISSTAKEAVYKAFEIA----SNRSFDTNIRLKLWSAE-EAKREILKLLSKFHLKFLITDTD--------DSKIILGESD-------PDKAAKAFS-D-YAE-----IIVMKLGPKG---AIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLREM------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114895 for 2758 contacts (-41.7/contact) +
2D Compatibility (PS) -32364 + (NN) -9127 + (LL) 3024
1D Compatibility (HY) -12400 + (ID) 3500
Total energy: -169262.0 ( -61.37 by residue)
QMean score : 0.436
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