Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKLNRIRHHLHSVQAELAVFSDPVTVNYLTGFFCDPHERQMFLFVYEDRDPILFVPALEVSRAKQSVPF-PVFGYIDSE--NPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVF-DGHFENLTPYIQNMRLIKSRDEIEKMLVAGEFADKAVQVGFDNISLNNTETDIIAQIEFEMKKQGINK------MSFDTMVLTGNNAANPHGIPGTNKIENNALLLFDLGVETLGYTSDMTRTVAVGKPDQFKKDIYHLCLEAHQAAIDFIKPGVLASEVDAAARNVIEKAGYGQYFNHRLGHGLGMDVHEFPSI-----MAGNDMEIQEGMCFSVEPGIYIP----DKVGVRIEDCGYVTKTGFEVFTKTPKELLYFEG |
| 1CHM Chain:A ((24-397)) | ANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLYCSFGRPYALVVT-EDDVISISANIDGGQPWRRTVGTDNIVYTDWQRDNYFAAIQQALP--KARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQYRTFGYGHSFGTLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPGAGGYREHDILIVNENGAENITKFPYGPEKNII |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200089 for 2969 contacts (-67.4/contact) +
2D Compatibility (PS) -37879 + (NN) -6165 + (LL) 208
1D Compatibility (HY) -10400 + (ID) 4000
Total energy: -258325.0 ( -87.01 by residue)
QMean score : 0.435
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