Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQQLSIDAP-KLVPLLRKGDSVAVNGVCLTVLDKSETAFIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSIDAPPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMA-QTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
3A35 Chain:A ((1-184))
MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISGDVVYFDI-DQAINTTTFRELEVGNKVNLEVRPEFGSLLGKGALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDIIFINY-PKNLSITTNLGTLEKGSDVNVETLN--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105695 for 1461 contacts (-72.3/contact) +
2D Compatibility (PS) -18529 + (NN) 5098 + (LL) 1956
1D Compatibility (HY) -13200 + (ID) 2250
Total energy: -132620.0 ( -90.77 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_3A35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A35-query.scw
PDB file :
Tito_Scwrl_3A35.pdb
: