Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMSAI-NQAYIRFRHYSDIGFPR--VMAGEWTTEY-FRFWRCKETLLEFGYREIDEATGIYFQEIYEH-ELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTLYVGDSYDNDIMGAFNGGWH-SMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
2GFH Chain:A ((17-253)) | RVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFH---CITDVRTSHW--EEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD--AIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLT-SSPMPHYMVSSVLELPALLQSIDCKVSMS---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128960 for 1815 contacts (-71.1/contact) +
2D Compatibility (PS) -24275 + (NN) -9939 + (LL) 4448
1D Compatibility (HY) -12000 + (ID) 2050
Total energy: -172776.0 ( -95.19 by residue)
QMean score : 0.394
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