Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MRRRIK--PIVVAVFFSLFGLLLI-------------------IGHLHSTNTLKKELVEAKKTIPSV-KASKVPQKSTSSKDKEF--------VLKPIIDVSGWQLPKEIDYDTLSKNISCVVIRVFGGSKISKTNNAAYTTGIDK------------SFKTHIKEFQKRNIPVAVYSYA------LGSSVKEMKEEAQIF---------YKNAAPYKPTFYW----IDVEEETMSNMNKGVQAFRKELKRLGAKNVGIYIGTYFMTE--------------QGISVKGFDAVWIPTYGSDSGYYE---AAPQTELKYDLHQYTSQGYLP----------GFNQPLDLNQIAVNKDKKKTYEKL--FGKVKE---- |
| 4D7E Chain:A ((1-413)) | METLLVVGAGPKALAVAAKSHVLRQLGLSAPRVIAVEAHAVGGNWLASGGWTDGRHRLGTSPEKDIGFPYHSTWARGHNREINEAMMAFSWTSFLVEHGTYAEWIDRGRPSPQHHVWAKYLQWVARKIDLELVLGKVRTIRQGWSVEVAGATTELEAD-GLMITGPGQSTKALAAHPRVLSIAEFWDLAGKRKLPISSRAAVIGGGETAGSALDELVRHEMLTISVISPMASYFENSLFSDPTKWNALSIQERRDVIRRTDRGVFSVRVQESLLGDNRVHHLQGRVTRIVGQGDGVAVTLRNEMRADQVHNFDLVVDATGGQPLWFLDLFDSESADLLELAVGGPLTQQRIESSIGYDLAVTGLGAKLYLPNMA-ALAQGPGFPNLSCLGELSDRVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D7E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21107 for 1771 contacts (11.9/contact) +
2D Compatibility (PS) -29485 + (NN) -9287 + (LL) 112
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -28353.0 ( -16.01 by residue)
QMean score : 0.121
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