Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFFTNKF-WLGVVSLFLAIL----LFLTATATSMNHQDNSKIAGASET-----------YTHTLTDVPIDIKYDSDDYFISGYSYGADVYMSSVNRVKLDSEINEDTRKFKVVADLTNMKPGTHKVPLKVVNLPSGVNATVSPTTITVTMGKKKTKEFPVYGHVNDKQIKAGYAVDKMSVDVSKVKVTSDESIIDRIDHV-AANIPDDKVLDDDFNKTVTLQAVTAD---GTVLASIIHPSK--ATLSVKVKKLTKTVPINLIPVGQFSDSISKINYKLSQEKAVISGTKEALEAISVINAEVDISDV-TKNTEKKINLSANNVSVDPAQVTVQLTTTKK |
| 1O89 Chain:A ((1-323)) | LQALLLEQQTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDW------------LVAMPQGLDARKAMIIG-TAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQV--VAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32015 for 2554 contacts (-12.5/contact) +
2D Compatibility (PS) -30325 + (NN) 5031 + (LL) 1604
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -62855.0 ( -24.61 by residue)
QMean score : 0.155
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