Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIVPATSANI-----------GPGFDSIGVALSK-YLSIEVLE-EST-EWLVEHNLVNIPKDHTNLLIQTALHVKSD---LAPHRLKMFSDIPLARGLGSSSSVIVAGIELANQLGNLALSQKEKLEIATRLEGHPDNVAPAIFGDLVISSIVKND-I-KSLEVM---F-PDSS--FIAFIPNYELKTSDSRNVLPQKLSY-EDAVASSS-VANVMVASLLKGDLVTAGWAIERD--LFH------ERYRQP---LVKEFGVIKQISTQNGAYATYLSGAGPTVMVLCSKEKEQPIVTELSKLCLDGQIQVLNIERKGVRVEKR |
| 3QT5 Chain:A ((5-326)) | GKARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTETKVTFDPDFTEDCLILNGNEVNAKEKEKIQNYMNIVRDLAGNRLHARIESENYVPTAAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGSG---SASRSIFGGFAEWEKGHDDLTSYAHGINSNGWEKDLSMIFVVINNQSKK-SRSGMSLTRDTSRFYQYWLDHVDEDLNEAKEAVKNQDFQRLGEVIEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMDAGPNVKVLVEKKNKQAVMEQFLKVFDESKIIASDIISSGVEIIK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135361 for 2261 contacts (-59.9/contact) +
2D Compatibility (PS) -30273 + (NN) -8446 + (LL) -44
1D Compatibility (HY) 4000 + (ID) 2700
Total energy: -172824.0 ( -76.44 by residue)
QMean score : 0.363
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