Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKIANTEVEINI------FNLLKKLWKK-KFLITFVAIAFATAGLFYSLFI-VTPQYTSSTRIYVI-NPNTPNNSITAQDLQAGSFLANDYKEIITSTDVLEKVISSEKLNYPSSQLLQKITVSILKDTRVISISVEDANPKMSQKLANSVREAAVSKIK-AV-TQVEDITTLE-KGNLP-KAPSSPNIKKNVLIGFIVGAGLSTIVLVIMGILDDRVNTEEDIEKVLGLTSL-GIVSDLNKL |
| 2AXO Chain:A ((38-266)) | AQEAVKGVVELFTSQGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAILNG-------RDHVKGADVRGIYDRLDAFKREGQGLNVPVSSKFAGDE--VEIDIGAGNGKADVVVAYFTREQTVDVKKMSYWHSVYDVQTVGMWDGSPMTVKLPASVVAKVKKG-----GCAVLLQTA--------NASGDPAAIVGASILLGNETQLEHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26086 for 1513 contacts (17.2/contact) +
2D Compatibility (PS) -20336 + (NN) 7207 + (LL) 1708
1D Compatibility (HY) 9200 + (ID) 600
Total energy: 23265.0 ( 15.38 by residue)
QMean score : -0.005
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