Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYEKLLERFLTYVKINTRSNPNSTQTPTTQSQVDFALTVLKPEMEAIGLKDVHYLPSNGYLVGTLPATSD-RLCHKIGFISHMDTAD-FNAENITPQIV-DYKGGDIELGDSGYILSPKDFPNLNNYHGQTLITTDGKTLLGADDKSGIAEIMTAMEYLASHPEIEHCEIRVGFGPDEEIGI-GADKFDVKDFDVDFAYTVDGGPLGELQYETFSAA-----------------GLELTFEG-RNVHPGTAKNQM-INALQLAMDFHSQLPENERPEQTDGYQGFYHLYDLSGT------VDQAKSSYIIRDF--EE-VNFLKRKHLAQDIADNM-------------------------------------------------------------------------------------NEALQSERVKVKLYDQYYNMKKVIEKDMTPINIAKEVMEEL-DIKPIIEPIRGGTDGSKISF--MGIPTPNLFAGGENMHGRFEFVSLQTMEKAVDVILGIVAKD |
| 2QYV Chain:A ((9-483)) | -QPKLLWQWFDQICAIPHPSYK----------EEQLAQF-IINWAKTKGFF-AERD-EVGNVLIRKPATVGMENRKPVVLQAHLDMVPQ------QDPILPYI--------------------------DGDWVKAKGT-TLGADNGIGMASALAVLESND----IAHPELEVLLTMTEERGMEGAIGLRPNWLRSEILINTDTEENGEIYIGCAGGENADLELPIEYQVNNFEHCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQNQP-------HFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNINLSGDYPGWE--PQSHSDILDLTKTIYAQVLGTDPEIKVIHAGLECGLLKKIYPTIDMVSIGPTIRNAHSPDEKVHIPAVETYWKVLTGILAHI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101922 for 2709 contacts (-37.6/contact) +
2D Compatibility (PS) -37704 + (NN) -16932 + (LL) 1084
1D Compatibility (HY) -8400 + (ID) 3100
Total energy: -166974.0 ( -61.64 by residue)
QMean score : 0.405
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