Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVYNINHGIGWASSGVEYAQAYRGSVLRKLGIDAKFIFTDFFSADNIISLTRNIGFQDKEIIWLYNFFSDIELAPTTFSIEDLQKQYLGKLVRKEDKGRVIKFFYEDENIYLTVYLDNFNKDKVHRVEIVSNNNLIRKDYYSYTRTFSEYYYPKDGVAHLYQRRFYNEDESTAFLEMVENSSSRFIINGRLLPSKVAFFDYFLESMTFTSKDIILLDRGTDTA-QSLLRHGKPAKLGTVVHAEHFSENAVTAD-TI----LWNNY--YDYQFTNANRFDFFITSTDKQTELLEQQFKQF------------------TNHNPRIITIPVGSIDNLKMPMD-------------------------------NRRPYSILTASRLASEKHVDWLVRAVIRIREILPEVTFDIYGSGGEE-----------EKIRNIINAANATEYIRLMG----HK---NLSNVY-QNYELYLTASKSEGFGLTLLEAIGAGLPLIGFDVRYGNQTFIKDGENGYLIPRFDMDVEEAIVEAFKEKVLQ----LFQ-QD-QKALREASYAIAE-GFLTNEVEGKWYNLVKELVQDD |
| 3S28 Chain:A ((405-769)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVHGKSGFHIDPYHG-------DQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102663 for 2225 contacts (-46.1/contact) +
2D Compatibility (PS) -30094 + (NN) -16746 + (LL) 15684
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -147019.0 ( -66.08 by residue)
QMean score : 0.372
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