Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASLRHQLFEKLDQKCDQMVAIRRYLHENPELSFKETKTAAYISDFYKGKDCHVQTQ-FGGMNGVVVDIYGDKATDKPIKHIALRADFDALPIQEETGLSFASKTAGVMHACGHDAHTAYLLILAESLIELKSEFSGHIRILHQPAEEVPPGGAK--AMIEAGCLDGIDAVLGIHVMSTMEEGTVQYHAGPIQTGRATFKVILQGKGGHGSM-PHRANDTIVAASSFVIAAQTIVSRRVNPFDTAVVTIGSFDGKGSANVIKDSVTLEGDVRVMSEETRGVVEEEFKRILDGIAQTYGVSYQLDYQ-NDYPVLVNNSEVTQKVANSLKSVAIKEILDVIDCDPQTPSEDFAYYAQTIPAC--FFYVGAHEEGQPYYPHHHP--KFQI----AESSLMVSAKSMATAALAMLEEGE |
| 3RAM Chain:A ((2-376)) | ----GEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSG----LDGPAIGFLAEYDALPGLG---HAC----GHNII------GTASVLGA-IGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGN--E-TYKT--ID--TLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQH-IK--KDQRVHGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEE-V-GE-A-VIDDDFGYGSTDTGNVSHVVPTIHPHIKIGSRN-----LVGHTHRFREAAASVHGDEALIKGAKIMALMGLELITNQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176804 for 3177 contacts (-55.7/contact) +
2D Compatibility (PS) -39452 + (NN) -18111 + (LL) 2284
1D Compatibility (HY) -10400 + (ID) 4050
Total energy: -246533.0 ( -77.60 by residue)
QMean score : 0.510
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