Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYERN-QRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGK-VNFHDIEILSDDKGAPLITKEPFNGKS------------FVSISHSGNYAQASVILEEEK
3QMN Chain:T ((5-127))
-IVGLGTDIAEIERVEKALARSGENFARRILTDSELEQFHA---SKQQGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISHDKLGKPLLI---LSGQAAELASQLQVENIHLSISDERHYAMATVILER--
General information:
TITO was launched using:
RESULT:
Template:
3QMN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38470 for 814 contacts (-47.3/contact) +
2D Compatibility (PS) -12276 + (NN) -7242 + (LL) 540
1D Compatibility (HY) -8800 + (ID) 2850
Total energy: -69098.0 ( -84.89 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3QMN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QMN-query.scw
PDB file :
Tito_Scwrl_3QMN.pdb
: