Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVATLIIIRGNSASGKSKIAKQLQAELG---ENTLLLSQDYLRREMLGTKDGE-NTTTIPLLINLLNYGYHNCSYIILEGILRSDWYTPVWKHILKHNPNNTYAYYYDLSFQETVKRHSTRLKSLEFGEDSLARWWLEKDFLK----E-IPEKILTKAM--SLEDVKKLIMTDVLP
3A4M Chain:A ((3-171))
-DIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFP-VWKEKYEEFIKKSTYRLIDSAL-KNYWVIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERG--EKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDIDFNEIAKKLIEKSKE
General information:
TITO was launched using:
RESULT:
Template:
3A4M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59852 for 1168 contacts (-51.2/contact) +
2D Compatibility (PS) -16530 + (NN) -4909 + (LL) 116
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -88875.0 ( -76.09 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_3A4M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A4M-query.scw
PDB file :
Tito_Scwrl_3A4M.pdb
: