Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITYQEFLSEKDSLSFEVCTQYFQDLVNSLDEVDEYSIIYWKDFITASLIYSQSRGEWLLLSREEKHAKDDTRTTKHNKFIYT--LKIYIAYSKQKGYEFPWFESIKDNRKQLGDLACYIAYIYAVNAR |
1IGN Chain:A ((94-242)) | --KRKFSADEDYTLAIAVKKQFYRDLFQ-IDPDTGRSLIRTQSRRG-----PIAREFFKHFAEEHAAHTENAWRDRFRKFLLAYGIDDYISYYEAE-------EPMKNLTPTPGNYNS----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 16612 for 607 contacts (27.4/contact) +
2D Compatibility (PS) -10262 + (NN) -467 + (LL) 2604
1D Compatibility (HY) -2400 + (ID) 950
Total energy: 5137.0 ( 8.46 by residue)
QMean score : 0.140
|
|
|