Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKTAFMAILFSLITVLSACGAGSQTTGAGQKKVQTITVGTGTQFPNICFIDEKGDLTGYDVELIKELDKRLPHYKFTFKTMEFSNLLVSLGQHKVDIVAHQMEKSKEREKKFLFNKVAYNHFPLKITVLQNNDTIRGIEDLKGKRVITSATSNGALVLKKWNEDNGRPFEI--AYEGQGANETANQLKSGRADATISTPFAVDFQNKTST-IKEKTVGNVLSNAKVY-FMFNKNEQTLSDDIDKALQEIIDDGTLKRLSLKWLGDDYSKEQY
4EQ9 Chain:A ((7-238))----------------------------------KKEIIVATNGSPRPFIYEE-NGELTGYEIEVVRAIFKDSDKYDVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAEKYLYAA-PIAQNPNVLVVKKDDSSIKSLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILNYTKA-DFQQIMVRLSDGQFDYKIFDKIGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQGQDELKSFVDKRIKELYKDGTLEKLSKQFFGDTY-----


General information:
TITO was launched using:
RESULT:

Template: 4EQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1108 -25474 -22.99 -111.73
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -22.99
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_4EQ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EQ9-query.scw
PDB file : Tito_Scwrl_4EQ9.pdb: