Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVFVARQPIFNR-KEQVVAYELLYRES-EENVYSA-K--D------GDQATTDLVINSFLNIGIEKLTEGKRCFVNFTESLM-FSNLP----------TSFNPKQLVIEILEDI--PITPALISRCKELKKMGYMLALDDFYAINPQDEDLLEKLMSY-IDILKIDFLKTTRM--------ERRTILQTYGCRGLIFLAEKVETRKEYKQAVQDGFQLFQGYFFSEPRIISGHDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQILKFLNSSHSRLSQKIESIQQAIMLLGFNEIKRWIYILSFKDLSRKGHSSKHEIIKISLIRAKLCELLARKTSRPQPASYMLIGMFSLIDTLLHREIEEIVQELPLKDEVGQALLGHQNDYYQMLELVKLIESNNWDTCSELGNQLDKEEAYECYLEALEWCHNLMDAK
3GFZ Chain:A ((176-398))-PCQFALQAIVEPAKKRVSSFEALIRSPTGG-SPVEMFAAIAAEDRYRFDLESKAYAFALAG---QLPLGKHQLAINLLPGSLYHHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAGMKLAIDDFGA-GYSG---LSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRPCLNG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 864 -21650 -25.06 -113.95
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -25.06
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_3GFZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFZ-query.scw
PDB file : Tito_Scwrl_3GFZ.pdb: