Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQKPKIAIFGGGTGLSVLLRGLKHK---PVDITAIVTVADDGGSSGRLRNELKIPPPGDIRNVLAALSDVEPLVEDLFQHRFNKGNDLTGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGKVLPAANASVVLHAEMEDGRVVSGESTIPEYGQRIKRVFLTPEQIDPLPETIDVIREADLIIIGPGSLYTSILPNLLVPKIGEEVIKAPAKKVYICNVMTQPGETLHYTAADHVKALNQHMGCGFIDTILVNSEDIPDEIKRKYEMESARPVDFDIEELKAMGLEVIRDQIVTYKNDVIRHDTHKVASLLVDLLKE
5HY5 Chain:A ((4-43))-RNPDKVVIVGGGTAGWMTASYLKKAFGERVSVTLV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5HY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 57 -7995 -140.26 -249.84
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -140.26
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.899

(partial model without unconserved sides chains):
PDB file : Tito_5HY5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HY5-query.scw
PDB file : Tito_Scwrl_5HY5.pdb: